I found many bad traces due to leaking battery. I used an oscilloscope to make sure I was getting the VC1 signal at FB485 from U204 (74F04) via Fat Agnus.
I then used an ohm meter to check R482, R483 (1 k), R470 (3.3k), R470 (1k pot phase adjust) resistors and the continuity going to them. I Jumper'd them on the back side of the mother board and used tape to hold them in place. I had no IC's or resistors that were bad. I now have a great picture using interlace screen modes. Now that I repaired the A3000D I ordered a Buddha IDE from icomp and get rid of my SCSI hard drive. I have a Buddha IDE in my A3000T. Now I can use a more reliable IDE hard drive or CD/DVD or SATA with an IDE to SATA adapter. My greatest need was a CD/DVD so I could load my 3.5, 3.9, 3.2 OS and other software that I have on CD. See schematic.